The idea behind the Saros concept is that you can create temporary documents for internal quality assurance, but that the main point is to compile the interactive website at the same time as creating the reports in PDF and Word (where all the chapters are merged and automatically added to the cover page, colophon, etc). In principle, several ways to start this process, but for now this is what works best:
000_initialize_project.R
under paths$site
, you use a folder on your machine, outside of OneDrive/Sharepoint/Teams. An example is “C:/Users/%HOMEPATH%/AppData/Local/Saros”.